Move dependencies from forks to original repositories

Description

Some of the dependencies are from a fork in the GitLab COPASI namespace. This is not optimal because all of these repositories evolve and is hard to keep track of the new updates together with the custom changes that we have made

Proposal

Move fork changes to original modules with Merge Requests and update our dependencies to it:

• dune-logging
  • fork in sync with origin
  • Send merge request from fork to origin
  • origin accepted merge request into origin/master
  • origin has a new release
  • Update dune-copasi dependecy into the last origin release
• dune-multidomaingrid
  • fork in sync with origin
  • Send merge request from fork to origin
  • origin accepted merge request into origin/master
  • origin has a new release
  • Update dune-copasi dependecy into the last origin release
• dune-typetree
  • fork in sync with origin
  • Send merge request from fork to origin
  • origin typetreeaccepted merge request into origin/master
  • origin has a new release
  • Update dune-copasi dependecy into the last origin release
• dune-pdelab
  • fork in sync with origin
  • Send merge request from fork to origin
  • origin accepted merge request into origin/master
  • origin has a new release
  • Update dune-copasi dependecy into the last origin release

How to test the implementation?

CI is smoothly working with original repositories instead of custom forks.

Related issues

See:

• staging/dune-typetree!55 (closed)
• staging/dune-typetree!86 (closed)
• staging/dune-typetree!85 (merged)