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fix an issue caused by generated files being added to source tree - move to a temporary location

Andreas Dedner requested to merge bugfix/removeGeneratedFilesFromGit into master

ctest runs the test script from the source directory so we need to test storing/loading of files using temporary file names to avoid polluting the source tree. Some generated files were added to the source tree by mistake I believe and I removed them. Fixes #111 (closed)

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