[dune-autogen] Prevents overriding am_dir with installed modules.
Before this patch we tried setting am_dir for directory with a DUNE module. If one is working with local modules (e.g. dune-common and dune-geometry), that are a subset of installed modules (e.g. dune-common, dune-geometry, and dune-istl), that are all installed under the same prefix, then modules that are part of the difference of the set of installed and the set of the local modules caused am_dir to point to the am directory of the installed dune-common directory. After this patch am_dir is only set once, which fixes this behaviour and flyspray issue #1420
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Branches feature/alglib-solver
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