[[Imported from SVN: r5815]]

[[Imported from SVN: r5812]]

* Infrastructure to warn about the use of deprecated preprocessor make
  variables.
* Use that infrastructure to war about MPI_CPPFLAGS.

[[Imported from SVN: r5807]]

  - Introduce autoconf substitutions DUNEMPICPPFLAGS, DUNEMPILDFLAGS and
    DUNEMPILIBS.
  - Deprecate MPI_LDFLAGS and MPI_CPPFLAGS: the automake manual recommends
    against "_" in names of such variables, MPI_LDFLAGS actually contains
    mainly libraries and simply changing MPI_LDFLAGS to MPI_LIBS will probably
    break a lot of stuff.  By deprecating MPI_CPPFLAGS it is possible to make
    the preprocessor generate a deprecation warning with instructions to
    change both MPI_CPPFLAGS and MPI_LDFLAGS (though this has yet to be
    implemented).

[[Imported from SVN: r5806]]

[[Imported from SVN: r5804]]

[[Imported from SVN: r5796]]

[[Imported from SVN: r5794]]

[[Imported from SVN: r5782]]

[[Imported from SVN: r5781]]

[[Imported from SVN: r5775]]

[[Imported from SVN: r5769]]

as a start to sort the mess, define 5 classes for variables used in the
autoconf/automake system

[[Imported from SVN: r5764]]

[[Imported from SVN: r5762]]

[[Imported from SVN: r5759]]

[[Imported from SVN: r5758]]

[[Imported from SVN: r5756]]

[[Imported from SVN: r5681]]

[[Imported from SVN: r5680]]

[[Imported from SVN: r5636]]

* bin/dunedoxynize reads a file doc/doxygen/Doxylocal
* it merges the file dune-common/doc/doxygen/Doxystyle
* it write Doxyfile.in

[[Imported from SVN: r5634]]

[[Imported from SVN: r5633]]

* every module uses either the alyout from dune-common or dune-web
* .wmlrc is not necessary anymore

[[Imported from SVN: r5622]]

* Turn STRIP_CODE_COMMENTS on in Doxyfile.in.  Otherwise, doxygen seems to
  remove comments from \code...\endcode blocks.  This has the side effect that
  comments are no longer stripped from the source code doxygen presents via
  the web interface, which is probably a good thing in itself.

[[Imported from SVN: r5616]]

how it works

[[Imported from SVN: r5591]]

- buggy (see FS 590)
- crappy
- not supposed to be in dune-common anyways

[[Imported from SVN: r5568]]

[[Imported from SVN: r5567]]

[[Imported from SVN: r5565]]

[[Imported from SVN: r5557]]

[[Imported from SVN: r5536]]

[[Imported from SVN: r5535]]

using the wml templates from dune-web.

[[Imported from SVN: r5529]]

[[Imported from SVN: r5528]]

[[Imported from SVN: r5526]]

[[Imported from SVN: r5501]]

no need to copy Makefile.am and Doxyfile from dune-grid, because duneproject creates the files for you

[[Imported from SVN: r5499]]

we can scrap a large part of the documentation that described on how
to tweak the output of duneproject.

[[Imported from SVN: r5495]]

Chapter 4 ('Toolchain') is now split in two chapters.
One on how to build a single module with the AutoTools
and one for sets of modules and dunecontrol.

[[Imported from SVN: r5464]]

[[Imported from SVN: r5463]]

'Getting started' and 'Creating your own module' have been
merged.  'Getting started' should contain something simpler,
like building and compiling the grid howto.

Actually, the description on how to create your own module
explains for the most part how you copy'n'paste files from
dune-grid to fit your own module.  It makes you wonder why
duneproject doesn't do that for you.

I also ran the spellchecker.  A very helpful tool indeed!


[[Imported from SVN: r5462]]

merge this aswell...


[[Imported from SVN: r5460]]