[[Imported from SVN: r5648]]

[[Imported from SVN: r5647]]

[[Imported from SVN: r5646]]

[[Imported from SVN: r5645]]

[[Imported from SVN: r5644]]

* update Makefiles and configure

[[Imported from SVN: r5643]]

if an implementation of shared_ptr has been found in either std, tr1, or boost, then use that one.  If not fall back on our own

[[Imported from SVN: r5642]]

rename the method count() to use_count().  This is the naming of the standard shared-pointer implementation

[[Imported from SVN: r5641]]

[[Imported from SVN: r5640]]

principle of least surprise: executables should have the same name as the source file that contains main()

[[Imported from SVN: r5639]]

again afterwards

... otherwise an update will fail if you run update on a directory
containing the symlink

[[Imported from SVN: r5638]]

[[Imported from SVN: r5637]]

[[Imported from SVN: r5636]]

* create example header file
* create doc/doxygen/Doxylocal
* allow to set the 4 options the command line

[[Imported from SVN: r5635]]

* bin/dunedoxynize reads a file doc/doxygen/Doxylocal
* it merges the file dune-common/doc/doxygen/Doxystyle
* it write Doxyfile.in

[[Imported from SVN: r5634]]

[[Imported from SVN: r5633]]

[[Imported from SVN: r5632]]

[[Imported from SVN: r5631]]

the class from SmartPointer to shared_ptr.  That way the implementation
is like the tr1 one.  The old file is deprecated.  The tr1 implementation
is not yet used even on platforms that have it, because I have to think
of a proper test first.

[[Imported from SVN: r5630]]

[[Imported from SVN: r5629]]

We'll need this for virtual shapefunctions.

[[Imported from SVN: r5628]]

[[Imported from SVN: r5627]]

This is meant as proposal for fs#597.

[[Imported from SVN: r5626]]

[[Imported from SVN: r5625]]

[[Imported from SVN: r5624]]

[[Imported from SVN: r5623]]

* every module uses either the alyout from dune-common or dune-web
* .wmlrc is not necessary anymore

[[Imported from SVN: r5622]]

[[Imported from SVN: r5621]]

* dunecontrol update defaults to skip-version-check

[[Imported from SVN: r5620]]

[[Imported from SVN: r5619]]

* run doxygen.css only if it exists

[[Imported from SVN: r5618]]

[[Imported from SVN: r5617]]

* Turn STRIP_CODE_COMMENTS on in Doxyfile.in.  Otherwise, doxygen seems to
  remove comments from \code...\endcode blocks.  This has the side effect that
  comments are no longer stripped from the source code doxygen presents via
  the web interface, which is probably a good thing in itself.

[[Imported from SVN: r5616]]

[[Imported from SVN: r5615]]

[[Imported from SVN: r5614]]

[[Imported from SVN: r5613]]

[[Imported from SVN: r5612]]

[[Imported from SVN: r5611]]

the headers. Fixed.

[[Imported from SVN: r5610]]

[[Imported from SVN: r5609]]