Merge branch 'fix-uggrid-vertex-reordering' into 'master'

See merge request !147

Handle unused boundary nodes correctly

Closes #55

See merge request !152

Merge branch 'bugfix/UseUG-pass-OBJECT-option' into 'master'

See merge request !149

Pass `OBJECT` option to `add_dune_mpi_flags`

See merge request !140

Apply vertex reordering to boundary segment vertices

Closes staging/dune-uggrid#18

See merge request !145

dune.module: prepare for 2.5.0 release

See merge request !138

(cherry picked from commit b28f00fc)

Merge branch 'bugfix/add_missing_header' into 'master'

[bugfix] add missing header guards and headers to make headercheck pass

See merge request !127

See merge request !135

The VTK tests are close to the timeout on the CI system and sometimes
fail.

In addition the parallel vtktest has one process busy with polling in a
MPI function, taking 100% CPU for doing nothing, while the main process
is running the Python script. In case of parallel builds, this
unexpected resource usage slows down the test even more.

(cherry picked from commit dce08c0d)

[bugfix] add missing header guards and headers to make headercheck pass

See merge request !127

Merge branch 'do-not-force-grids-to-subclass-master' into 'master'

Do not force grids to subclass Entity or Geometry

The current implementation assumes that both the Entity and the Geometry of a grid are subclasses of Dune::Entity and Dune::Geometry. This requirement must have been introduced after 2.4.1 and is IMHO to much of restriction. After all these are just tests. With this MR we drop this additional restriction. Tested with opm-grid.

Closes #36 

Should be in the release.

See merge request !114

See merge request !129

Merge branch 'feature/remove-generic-geometry' into 'master'

remove genericgeometry subdirectory from dune-geometry

The removal of the `genericgeometry` subdirectory in dune-geometry will require some minor changes to dune-grid. This merge request collects those and should be merged once the corresponding branch in dune-geometry is merged, too.

See merge request !120

See merge request !132

Christian Engwer authored 8 years ago and Ansgar Burchardt committed 8 years ago

remove genericgeometry subdirectory from dune-geometry

The removal of the `genericgeometry` subdirectory in dune-geometry will require some minor changes to dune-grid. This merge request collects those and should be merged once the corresponding branch in dune-geometry is merged, too.

See merge request !120

Do not force grids to subclass Entity or Geometry

The current implementation assumes that both the Entity and the Geometry of a grid are subclasses of Dune::Entity and Dune::Geometry. This requirement must have been introduced after 2.4.1 and is IMHO to much of restriction. After all these are just tests. With this MR we drop this additional restriction. Tested with opm-grid.

Closes #36 

Should be in the release.

See merge request !114

Merge branch 'cleanup/typos' into 'master'

[cleanup] fix some typos

See merge request !125

See merge request !126

Merge branch 'feature/vtkwriter-polyhedron' into 'master'

Polyhedron cells for VTKWriter.

This feature implements the support for polyhedrons in VTKWriter. This MR depends on !103 .

See merge request !105

See merge request !124

[cleanup] fix some typos

See merge request !125

Robert K authored 8 years ago and Ansgar Burchardt committed 8 years ago

Polyhedron cells for VTKWriter.

This feature implements the support for polyhedrons in VTKWriter. This MR depends on !103 .

See merge request !105

Merge branch 'feature/FS1721-grid-selector' into 'master'

Feature/fs1721 grid selector

See flyspray/FS#1721

allow to enable/disable the gridselector feature.

See merge request !98

See merge request !123

Merge branch 'feature/add-subentities-to-all-codims' into 'master'

add method Entity::subEntities to all codimensions

For polyhedral grids, it is not clear how many vertices a face (i.e., a
general polygon) has. For elements, this information is provided by the
(redundant) method Entity::subEntities. This patch add this usually
redundant method to entities of all codimensions.

See merge request !103

See merge request !122

Feature/fs1721 grid selector

See flyspray/FS#1721

allow to enable/disable the gridselector feature.

See merge request !98

add method Entity::subEntities to all codimensions

For polyhedral grids, it is not clear how many vertices a face (i.e., a
general polygon) has. For elements, this information is provided by the
(redundant) method Entity::subEntities. This patch add this usually
redundant method to entities of all codimensions.

See merge request !103

Merge branch 'bugfix/use-std-tuple-in-onedgrid' into 'master'

[bugfix] use std::tuple instead of plain tuple



See merge request !119

See merge request !121

Oliver Sander authored 8 years ago and Ansgar Burchardt committed 8 years ago

[bugfix] use std::tuple instead of plain tuple



See merge request !119

Cherry pick: Merge branch 'feature/remove-gcc4.4-conditional' into 'master'

No longer disable constructor for old GCC versions

DUNE already requires GCC 4.9 or later.

See merge request !104

See merge request !118

No longer disable constructor for old GCC versions

DUNE already requires GCC 4.9 or later.

See merge request !104

Closes #41

Merge branch 'feature/fix-staticcheck-subindex-codim' into 'master'

Fix codim for subIndex() method

For an entity e with codim=cc subIndex(e,i,codim) is only
available for cc<=codim<=dim. Instead of checking for codim=0
we now check for all codims in this range.

This fixed an issue mentioned in #37.

See merge request !115

See merge request !116

Fix codim for subIndex() method

For an entity e with codim=cc subIndex(e,i,codim) is only
available for cc<=codim<=dim. Instead of checkoing for codim=0
we now check for all codims in this range.

This fixed an issue mentioned in #37.

See merge request !115

Merge branch 'feature/document-codim-parameter' into 'master'

document sementics of codim parameter for IndexSet::subIndex

If an entity of codimension cc > 0 is passed into IndexSet::subIndex, what
is the semantics of the 'codim' parameter? In DUNE, codimensions are always
with respect to the grid dimension (see method subEntity of reference element).

This patch clearly states that codim is to be understood with respect to the
grid dimension.

See merge request !97

See merge request !112

Merge branch 'feature/fix-headercheck' into 'master'

Fix includes etc. to make headercheck pass

This should solve #35 .

See merge request !108

See merge request !111

Use `std::tuple` instead of `Dune::tuple`



See merge request !109

document sementics of codim parameter for IndexSet::subIndex

If an entity of codimension cc > 0 is passed into IndexSet::subIndex, what
is the semantics of the 'codim' parameter? In DUNE, codimensions are always
with respect to the grid dimension (see method subEntity of reference element).

This patch clearly states that codim is to be understood with respect to the
grid dimension.

See merge request !97

Fix includes etc. to make headercheck pass

This should solve #35 .

See merge request !108

Merge branch 'feature/avoid-calling-deprecated-size-methods' into 'master'

Avoid calling deprecated methods

This silences several compiler warnings from gcc 6.2.0 looking like this:

    dune/grid/common/grid.hh:730:45: warning:
    ‘int Dune::OneDGrid::overlapSize(int, int) const’ is deprecated:
    "overlapSize() is deprecated. Use the method on the
    LevelGridView instead." [-Wdeprecated-declarations]

See merge request !107

See merge request !110

Christian Engwer authored 8 years ago and Ansgar Burchardt committed 8 years ago

Avoid calling deprecated methods

This silences several compiler warnings from gcc 6.2.0 looking like this:

    dune/grid/common/grid.hh:730:45: warning:
    ‘int Dune::OneDGrid::overlapSize(int, int) const’ is deprecated:
    "overlapSize() is deprecated. Use the method on the
    LevelGridView instead." [-Wdeprecated-declarations]

See merge request !107

Merge branch 'feature/fix-uggrid-subindex' into 'master'

Fix subIndex method for UGGrid

When using Hygrid::ifElse always keep in mind that some types in
the functions given as "if" and "else" branch are fixed, such that
compilation may fail altough the template is not instanciated.

To avoid this, those functions have one templated parameter which
is instanciated with the identity for the selected branch. Passing
objects through this branch will delay resolution of their type
until instantiation which does only happen for the selected branch.

By passing the entity through `id` we use this to make subIndex
compile for clang. It seems that gcc is less picky here.

See merge request !101

See merge request !106